PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027116329.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 756aa MW: 82794.9 Da PI: 6.1852

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027116329.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.2	5.2e-16	461	498	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk XP_027116329.1 461 CKRCNCKKSKCLKLYCECFAAGVYCVEPCSCQECFNKP 498 89**********************************96 PP
2	TCR	51.2	2.5e-16	543	581	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN XP_027116329.1 543 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNA 581 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MGEEGERKEV EEVGKKKEVV VMDTPERSKN QINTPISKFE ESPVFSFLNN LSPIQPVKSV 60 HITQTLNALS FSSLPSVFTS PHASSLKESR FLRRHQLVDP SRPEFSSDSE KKIDGNGGIV 120 KYAHNSSEEQ ENFDPGNSLG ETSIEPSYDC SQLAVEFVRS LNYDCKSPIS SPKASCAASN 180 KGCDWESLIS DAADLLNFDT PKDVDSFNES PRSTTAFYTN NTNNIQNMQT FGCIEHQGEG 240 MDNENPSTQP GEGSCVMEFA EPEEVITSSS LNSECMEGSL SQKMDAEPVS NLYRGMRRRC 300 LVFEMAGARR KHLEENSGSV SSILLQSDGN TPSADKQLVP FKSGNDSSRC ILPGIGLHLN 360 ALATTPKEFK VVKQDASVAG RLVIAPSSTA NFQPIMAGQE SFNESLALTS TETDMDPTEN 420 AAPLTEDANQ LSALIANEEF NQISPKKKRR RLEVSGEPEG CKRCNCKKSK CLKLYCECFA 480 AGVYCVEPCS CQECFNKPIH EDTVLATRKQ IESRNPLAFA PKVIRSSDSL TEDDSSKTPA 540 SARHKRGCNC KKSGCLKKYC ECYQGGVGCS INCRCEGCKN AFGRKDGSIY IGTEAELEED 600 ETDALEKTVK DRKPHKTAIQ VDVEQQNPES APPATPLRFG RPSVQLPFSS KKKPPRSSLP 660 SIGSSSGLYP IQGLAKPNLL HPQPKFDKHF QTVQEDELPE ILQGNGSPIG GIKLASPNSK 720 RVSPPHCDFE MSPGRRSSRK LILQSIPAFP SLTPKH

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MGEEGERKEV EEVGKKKEVV VMDTPERSKN QINTPISKFE ESPVFSFLNN LSPIQPVKSV  60
HITQTLNALS FSSLPSVFTS PHASSLKESR FLRRHQLVDP SRPEFSSDSE KKIDGNGGIV  120
KYAHNSSEEQ ENFDPGNSLG ETSIEPSYDC SQLAVEFVRS LNYDCKSPIS SPKASCAASN  180
KGCDWESLIS DAADLLNFDT PKDVDSFNES PRSTTAFYTN NTNNIQNMQT FGCIEHQGEG  240
MDNENPSTQP GEGSCVMEFA EPEEVITSSS LNSECMEGSL SQKMDAEPVS NLYRGMRRRC  300
LVFEMAGARR KHLEENSGSV SSILLQSDGN TPSADKQLVP FKSGNDSSRC ILPGIGLHLN  360
ALATTPKEFK VVKQDASVAG RLVIAPSSTA NFQPIMAGQE SFNESLALTS TETDMDPTEN  420
AAPLTEDANQ LSALIANEEF NQISPKKKRR RLEVSGEPEG CKRCNCKKSK CLKLYCECFA  480
AGVYCVEPCS CQECFNKPIH EDTVLATRKQ IESRNPLAFA PKVIRSSDSL TEDDSSKTPA  540
SARHKRGCNC KKSGCLKKYC ECYQGGVGCS INCRCEGCKN AFGRKDGSIY IGTEAELEED  600
ETDALEKTVK DRKPHKTAIQ VDVEQQNPES APPATPLRFG RPSVQLPFSS KKKPPRSSLP  660
SIGSSSGLYP IQGLAKPNLL HPQPKFDKHF QTVQEDELPE ILQGNGSPIG GIKLASPNSK  720
RVSPPHCDFE MSPGRRSSRK LILQSIPAFP SLTPKH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	445	452	PKKKRRRL
2	446	451	KKKRRR
3	448	452	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-158	CPP family protein