PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027115936.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 353aa MW: 38486.4 Da PI: 4.5223 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.2 | 6.9e-17 | 31 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e ++++++ G++ W++Ia++++ gRt++++k++w+++l XP_027115936.1 31 RGNFTREEEETIINLHRSVGNK-WSLIASKLP-GRTDNEVKNYWNSHL 76 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MSKPTISAGL LRCGKSCRLR WINYLRADLK RGNFTREEEE TIINLHRSVG NKWSLIASKL 60 PGRTDNEVKN YWNSHLSRKI YSFRSSDGSS VTTLDMVNMP SKSKRKGGRV SRAVAKKYSM 120 HPITKAPITT ATNETSSSSK ISSTSGVQEA TTAAQNAQVG MVEATTHGVP ESAAAAEKVS 180 DDAAVGAVEE SGKHQLQPMA NNNYDYDESE GGCINSMHDI RCDGGEGCAR ALLVPSPEKL 240 EGEKGVAGPN DELDDVTLLL ESVLESELMD LSEISVRTGD TENESIMYPE SASINKDSDS 300 GASYSNSDTG DGLYDCFPPL DSYFNHTWDA EYAVPGFGLW DQEDDDVLWP WES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 4e-42 | MYB family protein |