PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027115547.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 476aa MW: 53119.3 Da PI: 6.8687

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027115547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	3.9e-52	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd++ k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_027115547.1 11 VPPGFRFHPTEEELLQYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQDKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69**************************.9***********954444122455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s +++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_027115547.1 105 YS-NSRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQDKC 60 KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNSRR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DNSTSNNAAE VENVCNAAAE AAAQEEGGWV VCRIFKKKNH 180 HIIKSLDHAT PFVTTCSIVT TAECTRGPRQ RLIGSSDDDD DERSLEKILE YMGRTCAEER 240 GRDQANQSAT PMFPMVPVDI VTKSTGQLCD RFMKLPGLES PKSSPRTTTT CTHACYQPIT 300 SLQVLPGRGG DDADDVPHDP CIALMSQVNV VNAADHLHSV NTTSTNYRPS ETAAGLSDWA 360 ALDRLVATHL NGQNETAKHL SSCFDGGDHP ADPRAVAAPC CGPPVPDQDL QLHYQLIRSL 420 SSSASSSDVI NNHHNHSCNN NKSRDYHHDE CELWSFVRSA LAPTDPPFSH MPNVRV

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQDKC  60
KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNSRR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD DNSTSNNAAE VENVCNAAAE AAAQEEGGWV VCRIFKKKNH  180
HIIKSLDHAT PFVTTCSIVT TAECTRGPRQ RLIGSSDDDD DERSLEKILE YMGRTCAEER  240
GRDQANQSAT PMFPMVPVDI VTKSTGQLCD RFMKLPGLES PKSSPRTTTT CTHACYQPIT  300
SLQVLPGRGG DDADDVPHDP CIALMSQVNV VNAADHLHSV NTTSTNYRPS ETAAGLSDWA  360
ALDRLVATHL NGQNETAKHL SSCFDGGDHP ADPRAVAAPC CGPPVPDQDL QLHYQLIRSL  420
SSSASSSDVI NNHHNHSCNN NKSRDYHHDE CELWSFVRSA LAPTDPPFSH MPNVRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-101	NAC family protein