PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027115179.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

BES1

Protein Properties

Length: 616aa MW: 68996.4 Da PI: 4.8613

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027115179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	139.8	2.7e-43	72	210	1	131
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas.... 87 ggs+r ++++E+E++k+RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ +g +p + +++++s+s XP_027115179.1 72 GGSRRCRPQEEKERTKLRERQRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQGARPVgGTCSTVVTSSSship 166 6899***************************************************************97778888889555544444442343 PP DUF822 88 aspesslqsslkssalaspvesysaspksssfpspssldsisla 131 a+++ +++++ ss + v+ ++++ks+ +p +s +d+ s+ XP_027115179.1 167 AQQTPPISLRGISSPYQNTVDYNACQMKSVFVPTSSPYDESSSI 210 3344444578889999999999**************998654 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MAAEMQRFVT SEDDDEEMGM DVKEEDDEDD DDGEKNIESP PMLGVDGGLA SASSNNRFVH 60 HQQYQEQPTP QGGSRRCRPQ EEKERTKLRE RQRRAITAKI LAGLRRHGNY NLRVRADIND 120 VIAALAREAG WVVLPDGTTF PSRSQGARPV GGTCSTVVTS SSSHIPAQQT PPISLRGISS 180 PYQNTVDYNA CQMKSVFVPT SSPYDESSSI RTNSSPLLGD GGDVHNDPLL GGSIDSLDNK 240 QVDISTKLQE RDFAGTPYVP VYVMLPLGII NMKCELVDPD GIIKQLRVLK SINVDGVMID 300 CWWGIVEAHV PQEYNWNGYK RLFQIVRELK LKLQVVMSFH ECGGNIGDDV CIPLPNWVAE 360 IGRSNPDIYF TDRAGRRNPE CLSWGIDKER VLRGRTAVEV YFDYMRSFRA EFDEFFEDGM 420 ISMIEVGLGP CGELRYPSYP VKHGWRYPGI GEFQCYDQYM LNSLRKAAEN RGHSFWARGP 480 DNAGSYNSCP HETGFFCDGG DYDGYYGRFF LNWYSQVLIE HGDRVLSLAN LVFEGTCIAV 540 KLSGTPWWYK TASHATELTS GFYNSCNRDG YAAIVAMLKK HGVILNFTCA GMSLLNQNVD 600 FSEALADPEG LTWQEI

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MAAEMQRFVT SEDDDEEMGM DVKEEDDEDD DDGEKNIESP PMLGVDGGLA SASSNNRFVH  60
HQQYQEQPTP QGGSRRCRPQ EEKERTKLRE RQRRAITAKI LAGLRRHGNY NLRVRADIND  120
VIAALAREAG WVVLPDGTTF PSRSQGARPV GGTCSTVVTS SSSHIPAQQT PPISLRGISS  180
PYQNTVDYNA CQMKSVFVPT SSPYDESSSI RTNSSPLLGD GGDVHNDPLL GGSIDSLDNK  240
QVDISTKLQE RDFAGTPYVP VYVMLPLGII NMKCELVDPD GIIKQLRVLK SINVDGVMID  300
CWWGIVEAHV PQEYNWNGYK RLFQIVRELK LKLQVVMSFH ECGGNIGDDV CIPLPNWVAE  360
IGRSNPDIYF TDRAGRRNPE CLSWGIDKER VLRGRTAVEV YFDYMRSFRA EFDEFFEDGM  420
ISMIEVGLGP CGELRYPSYP VKHGWRYPGI GEFQCYDQYM LNSLRKAAEN RGHSFWARGP  480
DNAGSYNSCP HETGFFCDGG DYDGYYGRFF LNWYSQVLIE HGDRVLSLAN LVFEGTCIAV  540
KLSGTPWWYK TASHATELTS GFYNSCNRDG YAAIVAMLKK HGVILNFTCA GMSLLNQNVD  600
FSEALADPEG LTWQEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein