PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027114355.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 474aa MW: 51252.5 Da PI: 5.5338

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027114355.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.3	1.1e-15	268	323	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l ++ ++ + XP_027114355.1 268 DAKRMRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISTKYNE 323 68******************************************999988877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MDRVFSVDDI ADQFWSPPPM PIRLGGDEEE SGSVSSSANN NNTTSSSKMI NRSSSEWAFQ 60 RFLQEASATN HSPSPPQPQP QPASSNPRPQ SDVVEINDNI SNRDSNAATS DNKNKILNNS 120 SDNLEVKVAS TTSFEGPVPP NIPVDSEEYQ AFLKSKLDLA CAAVALSRAN YMKPREFAAM 180 LPDSASQGSS TSTTPVASQV VSKGVGPDPV KGQDKDVGGP LGIPSLPALQ KKSGIQMRST 240 TSGSSREESD EDEGEEEIEV TENMDPADAK RMRRMLSNRE SARRSRRRKQ AHLTELETQV 300 SQLRVENSSL LKRLTDISTK YNEAAVDNRV LKADVETLRA KVKMAEETVK RVTGLSPLFQ 360 AMSEISTISL PSFAASPSGT STDAAVPIQD DSQHHYYQAP SGNHLPAHSP RIQNGMLEIP 420 SIDNNVCQNP ATTAASANKI GRTSSMQRVA SLEHLQKRIR GEVGSHGNQG NGDQ

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MDRVFSVDDI ADQFWSPPPM PIRLGGDEEE SGSVSSSANN NNTTSSSKMI NRSSSEWAFQ  60
RFLQEASATN HSPSPPQPQP QPASSNPRPQ SDVVEINDNI SNRDSNAATS DNKNKILNNS  120
SDNLEVKVAS TTSFEGPVPP NIPVDSEEYQ AFLKSKLDLA CAAVALSRAN YMKPREFAAM  180
LPDSASQGSS TSTTPVASQV VSKGVGPDPV KGQDKDVGGP LGIPSLPALQ KKSGIQMRST  240
TSGSSREESD EDEGEEEIEV TENMDPADAK RMRRMLSNRE SARRSRRRKQ AHLTELETQV  300
SQLRVENSSL LKRLTDISTK YNEAAVDNRV LKADVETLRA KVKMAEETVK RVTGLSPLFQ  360
AMSEISTISL PSFAASPSGT STDAAVPIQD DSQHHYYQAP SGNHLPAHSP RIQNGMLEIP  420
SIDNNVCQNP ATTAASANKI GRTSSMQRVA SLEHLQKRIR GEVGSHGNQG NGDQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	283	290	RRSRRRKQ
2	285	290	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	3e-66	bZIP family protein