PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027113345.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 387aa MW: 43988.4 Da PI: 8.0407

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027113345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.9	2e-49	25	150	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ XP_027113345.1 25 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTEN 118 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_027113345.1 119 FRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 150 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MAIAATMSQE NNNKDEHEHD HDMVMPGFRF HPTEEELIEF YLRRKVEGKR FNVELITFLD 60 LYRYDPWELP ALAAIGEKEW FFYVPRDRKY RNGDRPNRVT TSGYWKATGA DRMIRTENFR 120 SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PQHETERLQK AEISLCRVYK RAGVEDHPSL 180 PRSLPTRASS SRGTTSSSAK KSQEATNHAS MERFQAFVGN PQQLDEKLSE TSGSSCTDIG 240 TSLGLSKHNT FMSLAPMTTT LSVGAPSSVV EDDRVMLHQP KQLCSTTLAP DCTTIFAGSS 300 FVPTVNTTLD DLHRLVNFQQ ASMSQHQQQY HNNPNHPSQF SSLQPQVQQS LALNMLPGPL 360 QAAFTDRLWD WNSINEASKD FNNSPFK

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MAIAATMSQE NNNKDEHEHD HDMVMPGFRF HPTEEELIEF YLRRKVEGKR FNVELITFLD  60
LYRYDPWELP ALAAIGEKEW FFYVPRDRKY RNGDRPNRVT TSGYWKATGA DRMIRTENFR  120
SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PQHETERLQK AEISLCRVYK RAGVEDHPSL  180
PRSLPTRASS SRGTTSSSAK KSQEATNHAS MERFQAFVGN PQQLDEKLSE TSGSSCTDIG  240
TSLGLSKHNT FMSLAPMTTT LSVGAPSSVV EDDRVMLHQP KQLCSTTLAP DCTTIFAGSS  300
FVPTVNTTLD DLHRLVNFQQ ASMSQHQQQY HNNPNHPSQF SSLQPQVQQS LALNMLPGPL  360
QAAFTDRLWD WNSINEASKD FNNSPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-112	NAC family protein