PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027113288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 681aa MW: 78362.4 Da PI: 7.55 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.7 | 3e-21 | 62 | 155 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt ++++HnHel XP_027113288.1 62 EFYSDFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKTTNDNKPQRNRKSSRCGCQAYMRISKTTelgLPEWRVTGFVNHHNHELL 155 6**************9998877356667999***************999**********************99766679*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 681 aa Download sequence |
MSEEAAQMMV VYDDHSDQRS LSFEDTSSTE ESPDKTRLSI ETSNDVVPYI GQRFASHDAA 60 YEFYSDFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKTTND NKPQRNRKSS 120 RCGCQAYMRI SKTTELGLPE WRVTGFVNHH NHELLEPNQV RFLPAYRTIS DADKSRILMF 180 AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLLQSCR KVDPEDESID LLRMCRNIKD 240 KDPNFMFDFT LDLDNRLENI AWSYASSIQS YEIFGDAVVF DTTHRLTAFD MPLGIWVGIN 300 NYGMPCFFGC VLLREENLRT YSWALKAFLG FMNAKAPQTI LTDQNMCLKE AIELEMPSAK 360 HALCIWLIVA KFPSWFNAVL GERYNEWKAE FYHLYNLEST EDFELGWRDM VNSFGLHSNR 420 HIASLFALRS LWALPYLRSH FFAGMTTTVH SKSINAFIQR FLSAQTRLAH FVEQAAVTVD 480 FKDQMGEQQT MQQNLQNLCL KTGAPMESHA ATVLTPFAFS KLQEQLVLAA HYASFQMEDC 540 FLVRHHTKLD GGRKVYWVPR EGIISCSCHQ FEFSGILCRH ALRVLSTGNC FQIPDRYLPL 600 RWLRMSTPSA KLHQTTPSEH TDRIQLLQTI LSSLITECAK SRERLDIATE QVSILLSRIR 660 EHPVPVCPQG TRENSANPRN H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 0.0 | FAR1 family protein |