PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027113278.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 202aa    MW: 22843.1 Da    PI: 9.8462
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027113278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.71.7e-2732120189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     kfY +YA++vGF vr+ + ++s+++g++  r++ C+k+g++ +++ +  + +r+r + r gCka++ vk+ek+gkw+vt+++++HnH+l
  XP_027113278.1  32 KFYIDYARKVGFVVRIMQRRRSETDGRTLARRLGCNKQGFSPNNQGSVASGKRPRCSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 120
                     6**************************************************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MDVDGNTGQL KDSEVLEPYV GMEFESEDAA RKFYIDYARK VGFVVRIMQR RRSETDGRTL  60
ARRLGCNKQG FSPNNQGSVA SGKRPRCSAR EGCKATILVK MEKSGKWVVT RFVKDHNHPL  120
IISARGVSNG VRFLPNVDKD KKIEQLTLEL QRQDQLCTAY RNKLLNFLAS VEEQGEHLSS  180
KINGVIENVK KIEAEIQKSS CH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.15e-71FAR1 family protein