PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027113195.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 400aa MW: 44893.9 Da PI: 6.9357

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027113195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.6	1.1e-07	320	366	17	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ XP_027113195.1 320 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQHLILNMEN 366 89**********************************99988777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MDLSLSLSLS GVVSSFKLDR WEDICIHYWD KQQCCFKCHN ASTSFCLHYW DERECCFECQ 60 NASTSFCLHY WGTSCAWAMA NSKGPASMRN MMYNGRNSLL PPKSPFPSIT QPFVDYIPSS 120 VTGQKGNMRA REGNSHHQRT SSESHLIEEQ PSWLDDLLNE PETPVRRGGH RRSSSDSFAY 180 IDAANIGSID YAAQDESRYN MLPLPSWGSQ EFDHYRDAQH AAFVAEPNSL RKHKNRAWDA 240 SLSSVTHLRG FPSPSTILLS SGQSCAHQEA DVVPSSATEK HDIGDSGPQD SKGSSDKKDA 300 SHGKPATSET DTKRAKQQFA QRSRVRKLQY IAELERNVQA LQAEGSEVSA ELEFLNQQHL 360 ILNMENKALK QRLESLAQEQ LIKYGTNLIN AMCSGTRSTR

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MDLSLSLSLS GVVSSFKLDR WEDICIHYWD KQQCCFKCHN ASTSFCLHYW DERECCFECQ  60
NASTSFCLHY WGTSCAWAMA NSKGPASMRN MMYNGRNSLL PPKSPFPSIT QPFVDYIPSS  120
VTGQKGNMRA REGNSHHQRT SSESHLIEEQ PSWLDDLLNE PETPVRRGGH RRSSSDSFAY  180
IDAANIGSID YAAQDESRYN MLPLPSWGSQ EFDHYRDAQH AAFVAEPNSL RKHKNRAWDA  240
SLSSVTHLRG FPSPSTILLS SGQSCAHQEA DVVPSSATEK HDIGDSGPQD SKGSSDKKDA  300
SHGKPATSET DTKRAKQQFA QRSRVRKLQY IAELERNVQA LQAEGSEVSA ELEFLNQQHL  360
ILNMENKALK QRLESLAQEQ LIKYGTNLIN AMCSGTRSTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.1	4e-79	bZIP family protein