PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027112913.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 193aa MW: 22054.6 Da PI: 4.8119

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027112913.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	120.2	1.9e-37	8	127	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeelv ++L++k++ +++ +vi+++d+y ++PwdL+ k+ ae ++wyf+s+r + +r+t +gyWk g d+++ls+ XP_027112913.1 8 LPPGFRFYPTDEELVAHFLHRKAALLPCHP-DVIPDLDLYPYDPWDLDGKAMAEGNKWYFYSRRTQ--------SRITGNGYWKGMGVDEPILSS 93 79***********************999.99**********977778899**9854........799************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++ g+k+ vfy g+ ++g+kt+W+m+eyrl XP_027112913.1 94 tSGQKLGMKRCYVFYVGEPSEGVKTNWIMQEYRL 127 78899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MGDNNAKLPP GFRFYPTDEE LVAHFLHRKA ALLPCHPDVI PDLDLYPYDP WDLDGKAMAE 60 GNKWYFYSRR TQSRITGNGY WKGMGVDEPI LSSTSGQKLG MKRCYVFYVG EPSEGVKTNW 120 IMQEYRLSAE NGSSGSSRSS KKRHSKIDYS KWVVCRVYER NCDNNDDDDG TELSCLDEVF 180 LSLDDLDEIS LPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	5e-76	NAC family protein