PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027112475.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 359aa    MW: 40137.6 Da    PI: 9.123
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027112475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3413.4e-13401131899
                     --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     lp +f+++h+ k   +k ++lede+g+++e ++     +  + l++GWk F  a++L egD+vv +l+g+ +f  +v ++r+
  XP_027112475.1  40 LPVDFCRKHMPK--HDKLVILEDENGKEYEARF--LAAK--VGLSGGWKPFSIAQKLVEGDVVVYHLVGDCRF--KVYIVRA 113
                     8********855..6679***************..5555..55**************************9999..8888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MQRSHVTQGF WLVSPCLSRL KELTGYQLLC LTLYIQVQGL PVDFCRKHMP KHDKLVILED  60
ENGKEYEARF LAAKVGLSGG WKPFSIAQKL VEGDVVVYHL VGDCRFKVYI VRATSLGEVD  120
GALGLLNLEN HPSGRHSGGG GEGTKGTDMK GDGAIILNDA EGSGKSISFV NFQSFNIIAN  180
NLILDSELPK YVRLKYYDLC CAQKSYLHVG LLKSISCALA SGIISETVKI ADAIKSCKIL  240
TPQEDFALWD KTLEGFELLG MEVGFLRARL NKLVKLAMRS RKIQESKRYK QARIEHYFVT  300
EEVETLEKKL KEKHQLRLLQ QVFPAAVRRS SRVTDKPPPS YKEASFLIID STTNLTPAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-25B3 family protein