PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027112149.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

DBB

Protein Properties

Length: 212aa MW: 23300.3 Da PI: 6.0241

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027112149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.2	6.8e-08	3	33	4	34
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeH 34 ++C+ +e+ ++ fC ++ lC++C ++ H XP_027112149.1 3 TICDVCESAAAIVFCAADEAALCPSCDEKVH 33 68**************************998 PP
2	zf-B_box	27.6	6.2e-09	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 e + C+ +e+ ++ ++Ce +++ lC +C + H g H XP_027112149.1 52 EVPHCDICESAPAFFYCEVDGSSLCLQCDMLVHVGgkrtH 91 6789**************************9996544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MRTICDVCES AAAIVFCAAD EAALCPSCDE KVHMCNKLAS RHVRVGLAEP SEVPHCDICE 60 SAPAFFYCEV DGSSLCLQCD MLVHVGGKRT HGRYLLLRQR VEFPGNKPGR SDELGLQPMS 120 PGEARREALQ PSKLATNENQ QNHNTCPIPM LENDNHVGDK MESKLIDLNA RPQRLHGQAS 180 SNQEQGMEML SGSNHESVSV VPVASFKREN DK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-83	DBB family protein