PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027112077.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 338aa MW: 37431.5 Da PI: 6.803 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34 | 5.2e-11 | 57 | 106 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f+eL l ++ +K++Ka+iL+ A++ +k+L XP_027112077.1 57 RKVQKADREKLRRDRLNEQFAELGNTLDPD----RPKNDKASILTDAIQMVKEL 106 5677889********************997....79***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MDQFNHQETV YHHQQVQPPN PPLPEFGQPP PDMHLSSNRP NLDSRPEAVP KDSIATRKVQ 60 KADREKLRRD RLNEQFAELG NTLDPDRPKN DKASILTDAI QMVKELTAQI DKLKAEHAAL 120 NEESRELTQE KNDLREEKAS LKSDIESLNA QHQQRVRAMY PWAGMDHSVV MHPASYPFPL 180 PMPIPAGPIP MHPSLQPFPL YGNQNAAVVP SPVSTFVPYM APNSIIEQQS TQHVSQVTQP 240 GSRSHTSSRQ DSRPKACNQK DSRSEKSETS DDVATDLELK TPGSTVEQDV SPGQRKAKRS 300 SRKESNITEG SSSSRCSSSH SVQAASSSSV VGGTKTDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 6e-79 | bHLH family protein |