PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027111444.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 406aa MW: 45181.7 Da PI: 5.0566

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027111444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.6	8.7e-52	37	164	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yL++k+ gk++++ +++ e+d+yk+ePw+L +++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd++v XP_027111444.1 37 LAPGFRFHPTDEELVRYYLRRKACGKPFRF-QAVCEIDVYKSEPWELAsySSLKTRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRPVR 130 579***********************99.88**********84337777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k++++g+kktLvf++grap+g++t+Wvmheyrl XP_027111444.1 131 H-KSQTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 164 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGQELVAVAV APSSSTTAVL GGGIGGSPVG APPPTSLAPG FRFHPTDEEL VRYYLRRKAC 60 GKPFRFQAVC EIDVYKSEPW ELASYSSLKT RDLEWYFFSP VDRKYGNGSR LNRATGKGYW 120 KATGKDRPVR HKSQTIGMKK TLVFHSGRAP DGKRTNWVMH EYRLVDEELE KAGVAQDVFV 180 LCRIFQKSGL GPPNGDRYAP FVEEEWDDDT ALLIPGGEAE DDMANGDEAR VDCNDLTPDI 240 NKTPRVIEHP SEPQGIPFIC KRERSEDPEP LSLGQNKRSK QDDPNSSHAN GSEDSTTTSQ 300 DPPPTMMTTN FSSALLEFPL LESVEPKETQ PASTATFDSS NLEKSVPPGY LKFISNLENE 360 ILNVSMERET LKIEVMRAQA MINILQSRID LLNKENEDLR RLVRGG

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGQELVAVAV APSSSTTAVL GGGIGGSPVG APPPTSLAPG FRFHPTDEEL VRYYLRRKAC  60
GKPFRFQAVC EIDVYKSEPW ELASYSSLKT RDLEWYFFSP VDRKYGNGSR LNRATGKGYW  120
KATGKDRPVR HKSQTIGMKK TLVFHSGRAP DGKRTNWVMH EYRLVDEELE KAGVAQDVFV  180
LCRIFQKSGL GPPNGDRYAP FVEEEWDDDT ALLIPGGEAE DDMANGDEAR VDCNDLTPDI  240
NKTPRVIEHP SEPQGIPFIC KRERSEDPEP LSLGQNKRSK QDDPNSSHAN GSEDSTTTSQ  300
DPPPTMMTTN FSSALLEFPL LESVEPKETQ PASTATFDSS NLEKSVPPGY LKFISNLENE  360
ILNVSMERET LKIEVMRAQA MINILQSRID LLNKENEDLR RLVRGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-111	NAC family protein