PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027110973.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GRAS | ||||||||
Protein Properties | Length: 725aa MW: 81678.4 Da PI: 6.656 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 398.4 | 7.2e-122 | 352 | 722 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL+ cA+av+++d + a+++L+++++++sp+gd mqRla+yf+ +L+ar+a+s++++ykal + +ts +++l+a++l+ ++P+ k+s+ XP_027110973.1 352 LRTLLTLCAQAVAADDRRTANEFLKQIRQHCSPTGDGMQRLAKYFADGLEARMAGSGTQIYKALITMPTS---AADVLKAYQLYLAACPFRKISN 443 5789************************************************************999999...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 + N++I a+e+ +++HiiDf+i +G+QWp+L+q L+sRp+gpp+lRiTg++ p++g +e++eetg+rLa++Ae+++vpfefn+ +a+++e+ XP_027110973.1 444 FFSNKMIWHAAEEGSTLHIIDFGILYGFQWPCLIQRLSSRPGGPPKLRITGIDLPHPGfrPAERVEETGRRLANYAETFKVPFEFNA-IAQKWET 537 ********************************************************9999***************************.7****** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 +++e+L+++++E+laVn+ +++ +llde+v ++s+r+ vL+l+++++P+v+v+ + +n++ F++rf eal +ys++fd+le+++pre +er+ XP_027110973.1 538 VRIEDLKIREDEVLAVNCLYRMRNLLDETVVVNSPRNIVLNLIRKMKPDVFVLGIVNGAYNAPFFVTRFREALFHYSSFFDMLEVNIPREIHERM 632 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +E+ ++gre++nv+ace aer+er et+++W+ r +aGF+++pl+e+++ ak + +++d + ++e+s++l++gWk+r L+++S+Wr XP_027110973.1 633 LLEKTIFGREAMNVIACEAAERVERPETYKQWQVRNLRAGFRQLPLNEDIMRMAKERAKSYDKD-FVIDEDSQWLLQGWKGRILYALSSWR 722 **************************************************************77.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 725 aa Download sequence |
MVMDGNSRVG YGTTSGIELN NEGVSVVPNP NLIGSLRLDG NVVERNYASR LSVQSHLYPN 60 VFVPLSSGDS NEDYDFSDAV LKYINDILME EEMEDKGCMF QESAALQAAE KSFYDVLGEK 120 YPPPPDHQVP SSNLRVPSRD ESYLGGYDGL IWCPSWNNDA SGSDSTYVQH FSPYSSSNST 180 GTVADGHIDS PDSILRISDI FSDSQSAMQF KKGVEEASKF LPNGNALLVD SHENGLLDKD 240 QKKWPMTVKV ERSENGYSPD ESRGKKNPLH EDLQQLGGRS NKQSAVFTES TVRSDLFDKV 300 LLCSGGRNES DLRKALQDIA VKNVPQNNKL KGSSGGKSRS KKQAAKRNVV DLRTLLTLCA 360 QAVAADDRRT ANEFLKQIRQ HCSPTGDGMQ RLAKYFADGL EARMAGSGTQ IYKALITMPT 420 SAADVLKAYQ LYLAACPFRK ISNFFSNKMI WHAAEEGSTL HIIDFGILYG FQWPCLIQRL 480 SSRPGGPPKL RITGIDLPHP GFRPAERVEE TGRRLANYAE TFKVPFEFNA IAQKWETVRI 540 EDLKIREDEV LAVNCLYRMR NLLDETVVVN SPRNIVLNLI RKMKPDVFVL GIVNGAYNAP 600 FFVTRFREAL FHYSSFFDML EVNIPREIHE RMLLEKTIFG REAMNVIACE AAERVERPET 660 YKQWQVRNLR AGFRQLPLNE DIMRMAKERA KSYDKDFVID EDSQWLLQGW KGRILYALSS 720 WRPAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | GRAS family protein |