PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027109688.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 275aa    MW: 30773.3 Da    PI: 5.0969
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027109688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-20114164255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r +lg+fgtaeeAa a+++a++k++g
  XP_027109688.1 114 HYRGVRRRP-WGKYAAEIRDS---SrKGARLWLGTFGTAEEAAMAYDKAALKIRG 164
                     7********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MAQDEKSTIL ENVWANYIAK SELENAHQNP VESSQTWHDL PGLNSRDGSL LERLPSLGRF  60
ISMGAEAWEQ LLDGANLPNN TESSRTVHSQ ETCSSKKMDS GADEIKVKKV VTRHYRGVRR  120
RPWGKYAAEI RDSSRKGARL WLGTFGTAEE AAMAYDKAAL KIRGPKAYLN FPLETVAEAM  180
GTCKSIPQDY MDSSATSCQT NDTTTSASVT CGEIMSNSRK RVLREWDKTE DSFINNAQSA  240
KISAEYWEEA PMSDINLLQF PNLESEYLEN LFSLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.13e-33ERF family protein