PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027109649.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

SRS

Protein Properties

Length: 204aa MW: 22272.8 Da PI: 8.7441

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027109649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	102.4	8.1e-32	15	89	3	78
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel 78 s t++CqdCGnqakkdC++ RCRtCCk+rgf+C+thvkstWvp++krr r+ ++ + s+ +++ ++ ++kr+re+ XP_027109649.1 15 SSTTRCQDCGNQAKKDCVYLRCRTCCKTRGFQCQTHVKSTWVPVSKRRPRHPHQLIS-STPQHHLSDPNPKRSREE 89 57889********************************************97666554.444455677777777765 PP
2	DUF702	80.5	4.3e-25	86	145	96	155
DUF702 96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155 s++el ++P+e++++avfrcvrvss+d+ +++aYqt+v+i+GhvfkG+LydqG++++ XP_027109649.1 86 SREELIEGNFPAELNVPAVFRCVRVSSMDNVVDQFAYQTSVNIAGHVFKGVLYDQGPDNQ 145 344455566************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MMRQDESGGA VGSSSSTTRC QDCGNQAKKD CVYLRCRTCC KTRGFQCQTH VKSTWVPVSK 60 RRPRHPHQLI SSTPQHHLSD PNPKRSREEL IEGNFPAELN VPAVFRCVRV SSMDNVVDQF 120 AYQTSVNIAG HVFKGVLYDQ GPDNQYNIPG ESSSGGGGGG GGSFQQPNLI TQTTSTSTPS 180 PHSTYPSPYS AFMPGAHFFP YPKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21400.1	1e-48	SRS family protein