PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027109531.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 287aa MW: 32422.8 Da PI: 7.4088

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027109531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.9	2.8e-10	144	198	5	59
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 kr++r NR +A rs +RK ++i +Leekvk+L ++ L +l + + e +l XP_027109531.1 144 KRAKRIVANRHSAARSKERKAQYIVNLEEKVKTLNSQVALLNTRLTTTQRETTEL 198 9***********************************9888887777766665555 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MISSPFKGSL DCAWTPELTV KTFDNDDDNV IVDFDIDFDD DLFSVYMDVK KLEEKENDVN 60 VGLDNHDVLQ NGGGFVAGSC GGGRCRGRRK RKDKSKTAII TTQPRKQRQR RGLKGCLVDE 120 KRFVEPRKAM APEELAELWA IDPKRAKRIV ANRHSAARSK ERKAQYIVNL EEKVKTLNSQ 180 VALLNTRLTT TQRETTELVA EKSELRCQLQ TLESQTEQID AQNAALKLEI QWLKAVTGEL 240 DDPCHVCQSE SLQFPTSMST HQKPLLHNCQ PSTLSPYLHV ASPQPLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	93	RRKRKD
2	88	94	RRKRKDK
3	89	95	RRKRKDK
4	157	165	ARSKERKAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40620.1	3e-30	bZIP family protein