PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027108765.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 194aa MW: 22370.5 Da PI: 10.068

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027108765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.6	5.7e-54	7	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yLk kv++ +++l ++i+e+d+yk++PwdLp k+ +e+ew+fFs+rd+ky++g r+nr+++sgyWkatg+dk++ls XP_027108765.1 7 LPPGFRFHPTDEELINYYLKSKVSSATNPLVSIIAEIDLYKFNPWDLPDKALFGESEWFFFSPRDRKYPNGARPNRSAASGYWKATGTDKPILSY 101 79**************************999***********7777899************************************ PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g+kk Lvfykgrap+g+kt+W+mheyrl XP_027108765.1 102 ASQCIGVKKALVFYKGRAPNGTKTNWMMHEYRL 134 *****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MEGINVLPPG FRFHPTDEEL INYYLKSKVS SATNPLVSII AEIDLYKFNP WDLPDKALFG 60 ESEWFFFSPR DRKYPNGARP NRSAASGYWK ATGTDKPILS YASQCIGVKK ALVFYKGRAP 120 NGTKTNWMMH EYRLLNDSHH SLVQKGSMRL DDWVLCRVRQ KSNFPKSPFN DPNRNHFQSV 180 RNGNFISNIF MSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	3e-75	NAC family protein