PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027108321.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 313aa MW: 34615 Da PI: 7.3605 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.3 | 3.5e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l++++++ G g+W++ +r g+ R++k+c++rw +yl XP_027108321.1 15 KGPWTPEEDEKLIEYINKNGHGSWRSLPRNAGLLRCGKSCRLRWTNYL 62 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 47.3 | 4.9e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_027108321.1 68 RGPFSPDEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MGRAPCCDKR MGLKKGPWTP EEDEKLIEYI NKNGHGSWRS LPRNAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FSPDEEKLVI QLHGILGNRW AAIASQLPGR TDNEIKNLWN THLKKRLICL 120 GIDPQTHEPC SNLSGLLQRL PASPSTRHMA QWESARLEAE ARLSKESLLF VPSSTGKSDS 180 DHILRIWNSE VGEAFRNFNK SQKIACESSI SQASSSTKCG SAASGTIAER SLCLAGPSVA 240 GVNQIEDTKC QSSRSAFEDI PPRSDSASSN DLEDSSESTL QLLLDFPGTN DMSFLATTDD 300 YMMYSANNEL NVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-122 | MYB family protein |