PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027106631.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 411aa MW: 46104.5 Da PI: 5.9786

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027106631.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.4	2.3e-56	17	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL+kkv +k++ + +i+evd++k+ePwdLpkk+k +eke +fF++rd+ky+tg r+nrat sgyWkatgkdke+++ XP_027106631.1 17 LPPGFRFHPTDEEIITHYLTKKVVDKNFGA-IAIAEVDMNKCEPWDLPKKAKMGEKEHFFFCQRDRKYPTGMRTNRATGSGYWKATGKDKEIYKG 110 79***********************999.88***********99999*************************************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg lvg+kktLvfy+grapkgekt+Wvmheyrle XP_027106631.1 111 KGCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 144 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MEGVPVVLNE EDDLMDLPPG FRFHPTDEEI ITHYLTKKVV DKNFGAIAIA EVDMNKCEPW 60 DLPKKAKMGE KEHFFFCQRD RKYPTGMRTN RATGSGYWKA TGKDKEIYKG KGCLVGMKKT 120 LVFYRGRAPK GEKTNWVMHE YRLEGRFSYY NFPKGAKDEW VVCRVFHKNV GIRRSPLRDL 180 TRADSFLDHL LDSPSSLPPL MDIPNSSNRP GISSFSHEED QEFKGATTSS GKSSDHGTLP 240 SYFSTNLNNS TLQMQQDLNT FLMPSYNYAF KTSYEAGSSN HDPSSFFCPP ISVPAANFHG 300 YQNESYSSFS GFKATPDHQA NSSTLSAPNQ QGISDPGKQC KMEQFSSTNS MVSPSQDTGI 360 SNDMAPEISS VVSKINVESD KCMKDLEGIS VDPNMSDLDS LWNITDFTTE E

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MEGVPVVLNE EDDLMDLPPG FRFHPTDEEI ITHYLTKKVV DKNFGAIAIA EVDMNKCEPW  60
DLPKKAKMGE KEHFFFCQRD RKYPTGMRTN RATGSGYWKA TGKDKEIYKG KGCLVGMKKT  120
LVFYRGRAPK GEKTNWVMHE YRLEGRFSYY NFPKGAKDEW VVCRVFHKNV GIRRSPLRDL  180
TRADSFLDHL LDSPSSLPPL MDIPNSSNRP GISSFSHEED QEFKGATTSS GKSSDHGTLP  240
SYFSTNLNNS TLQMQQDLNT FLMPSYNYAF KTSYEAGSSN HDPSSFFCPP ISVPAANFHG  300
YQNESYSSFS GFKATPDHQA NSSTLSAPNQ QGISDPGKQC KMEQFSSTNS MVSPSQDTGI  360
SNDMAPEISS VVSKINVESD KCMKDLEGIS VDPNMSDLDS LWNITDFTTE E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-104	NAC family protein