PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027106538.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 308aa    MW: 33262.4 Da    PI: 6.511
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027106538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18120170256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g+
  XP_027106538.1 120 TYRGVRKRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 170
                     69****887.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MLSLAASTTP PLIIMGKQIN IGSLANHDSN LSSSSTTTTT SSSSSFSTTS NALNSPSTTS  60
TSSSSSSSNQ STKATTSTRT AKAGKAQESS QELQQVAKIN GNENQPRKKH KNGDDEKHPT  120
YRGVRKRNWG KWVSEIREPR KKSRIWLGTY PTAEMAARAH DVAALAIKGH SAYLNFPHLA  180
HELPRPATTS PKDIQAAAAK AAAATFPGEN GGGAEAEPIQ AELTNCHSST DFSLHNMQES  240
SNSPSTDDDI DDTFFDLPDL SFDVTGATDH LDGFNCFHGS SSWWPQLHPA PAAEPVFRLE  300
EPFLWEWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.14e-48ERF family protein