PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027105616.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family BES1
Protein Properties Length: 325aa    MW: 34789.8 Da    PI: 8.3614
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027105616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.31.2e-6521451148
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGwvve+DGttyrkg+kp e+++++g sa++sp+ss+q
  XP_027105616.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGCKPAERMDIIGGSATMSPCSSYQ 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                             +sp  sy++sp+sssfpsp+s+  + +a+     +sl+p+l++ls+ ss
  XP_027105616.1  97 --------PSPGVSYNPSPSSSSFPSPVSSHYAANANGsadaNSLIPWLKNLSSGSS 145
                     ........9******************9988776665567779********998544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG  60
WVVEEDGTTY RKGCKPAERM DIIGGSATMS PCSSYQPSPG VSYNPSPSSS SFPSPVSSHY  120
AANANGSADA NSLIPWLKNL SSGSSPASSK LPHHIYIPGG SISAPVTPPL SSPTARTPRM  180
QDNWNEQICG SVWGQQYAFL PSSTPPSPSR QTPPDSGWLS GVQTPQDGPS SPTFSLVASN  240
PFGIKEPLSN GGSRMWTPGQ SGACSPAIAA GFDQTADVPM ADAVSAEFAF GNSTKGLVKP  300
WEGERIHEEF VSDDLELTLG NSKTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-108BES1 family protein