PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027105310.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 353aa MW: 38452.8 Da PI: 7.7622

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027105310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.2e-39	54	114	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ XP_027105310.1 54 QQPPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 114 56789*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MLGNCEKMVV ISSSTSNEWP LQPQNQMIDE KGLMDQSTAA KMMEKPSQDQ QQQQQPPLKC 60 PRCDSSNTKF CYYNNYSLSQ PRHFCKACKR YWTRGGTLRN VPVGGGCRKN KRVKRPASTN 120 EATSTSAQTA TSNPSHVVPP GQIDLSCSSA GNHINPLFYS LLTNNHHPSE LNFPYPARFN 180 TSNGYDLLQP QMNGLGLGFS SGPLASDVNG SDYRNGINSI SSNKQIQDVG VIPSNSLLSS 240 YSNSIFGSTS TSTTSTMASL IASTLQQQKM IFGGGFEGFE DMQMHPPRSG ENSVVVKDVK 300 MEEGQHRLDW SVASNQNHID QINSSDPSLL WNATGVGAWL DPSNVGSSVP SLI

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MLGNCEKMVV ISSSTSNEWP LQPQNQMIDE KGLMDQSTAA KMMEKPSQDQ QQQQQPPLKC  60
PRCDSSNTKF CYYNNYSLSQ PRHFCKACKR YWTRGGTLRN VPVGGGCRKN KRVKRPASTN  120
EATSTSAQTA TSNPSHVVPP GQIDLSCSSA GNHINPLFYS LLTNNHHPSE LNFPYPARFN  180
TSNGYDLLQP QMNGLGLGFS SGPLASDVNG SDYRNGINSI SSNKQIQDVG VIPSNSLLSS  240
YSNSIFGSTS TSTTSTMASL IASTLQQQKM IFGGGFEGFE DMQMHPPRSG ENSVVVKDVK  300
MEEGQHRLDW SVASNQNHID QINSSDPSLL WNATGVGAWL DPSNVGSSVP SLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	2e-35	Dof family protein