PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027104902.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 582aa MW: 64861 Da PI: 4.3666

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027104902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.8	5.2e-54	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yL++k+ gk+++l ++i+e+diyk+ePw+Lp k ++k+++ ewyfFs dkky +g+r+nrat++gyWk+tgkd++v XP_027104902.1 9 LAPGFRFHPTDEELVRYYLRRKLCGKPFRL-DAISEIDIYKAEPWELPgKsRLKTRDLEWYFFSVLDKKYGNGSRTNRATEEGYWKTTGKDRPVR 102 579*************************.99***********6347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+++vg+kktLv+++grapkg++t+Wvmheyrl XP_027104902.1 103 H-KSQVVGMKKTLVYHSGRAPKGQRTNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MFSKTSTSLA PGFRFHPTDE ELVRYYLRRK LCGKPFRLDA ISEIDIYKAE PWELPGKSRL 60 KTRDLEWYFF SVLDKKYGNG SRTNRATEEG YWKTTGKDRP VRHKSQVVGM KKTLVYHSGR 120 APKGQRTNWV MHEYRLIDEE LEKAGIVQDA FVLCRVFQKS GSGPKNGEQY GAPFVEEEWE 180 EDELEMVPKE EAAEEVEVGD DSYWDGIDLD QILGTEIPPD NDHMSLNVVA GENVASVEEN 240 TDSSNDPQKL LVSNLPLEFY SGENVRGGEE TTGSNNDSQN HLVGAGEYNC VPEQSDDQNS 300 YNLPVHYDLH QKAVKREYIG EPSNALDAEN VNYLLDEPYM DALDNLQFDD GAFLETNDLS 360 NPIAADASAF GMLEEYLNFY DADGEIPPYM NHDLPEMMGI NETLVSGQAS ILPKESEEKA 420 QSAEESSEKL LGRGDVASSS KEEPTKEYFQ YPFIKQASRM LGSIPAPPAF ASEFPSEDAT 480 LLLDPSSSST AHVTAGMIQI GNIGPGSHGM DWLFGKHGRY NVVLSFGLSR GDDNSTTLES 540 VVSIRPGKAA ASGMSRGWFC FIFFWVLVLS VGFKIGTCIC AR

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MFSKTSTSLA PGFRFHPTDE ELVRYYLRRK LCGKPFRLDA ISEIDIYKAE PWELPGKSRL  60
KTRDLEWYFF SVLDKKYGNG SRTNRATEEG YWKTTGKDRP VRHKSQVVGM KKTLVYHSGR  120
APKGQRTNWV MHEYRLIDEE LEKAGIVQDA FVLCRVFQKS GSGPKNGEQY GAPFVEEEWE  180
EDELEMVPKE EAAEEVEVGD DSYWDGIDLD QILGTEIPPD NDHMSLNVVA GENVASVEEN  240
TDSSNDPQKL LVSNLPLEFY SGENVRGGEE TTGSNNDSQN HLVGAGEYNC VPEQSDDQNS  300
YNLPVHYDLH QKAVKREYIG EPSNALDAEN VNYLLDEPYM DALDNLQFDD GAFLETNDLS  360
NPIAADASAF GMLEEYLNFY DADGEIPPYM NHDLPEMMGI NETLVSGQAS ILPKESEEKA  420
QSAEESSEKL LGRGDVASSS KEEPTKEYFQ YPFIKQASRM LGSIPAPPAF ASEFPSEDAT  480
LLLDPSSSST AHVTAGMIQI GNIGPGSHGM DWLFGKHGRY NVVLSFGLSR GDDNSTTLES  540
VVSIRPGKAA ASGMSRGWFC FIFFWVLVLS VGFKIGTCIC AR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-135	NAC family protein