PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027103941.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 356aa MW: 41216.3 Da PI: 6.0532 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179 | 1.2e-55 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk++ ++++l +vik+vd+yk+ePwdL++ ++ +ee+ ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_027103941.1 7 VPPGFRFHPTDEELVDYYLRKKINCRRIDL-DVIKDVDLYKIEPWDLQElcRIGTEEQsEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100 69****************************.9***************954555554445************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_027103941.1 101 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 **.8899****************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 356 aa Download sequence |
MNTFTHVPPG FRFHPTDEEL VDYYLRKKIN CRRIDLDVIK DVDLYKIEPW DLQELCRIGT 60 EEQSEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRIAT MRKVSEHESP IWYDDQVSFM 180 AEMDSPKQHS QSNLTYQYPY SCKKETNLHY QIPPDHFLQL PLLESPKLLP APASMACNSL 240 PTYGVNMTHA SALQSSALTL EHMNQSQDQG LHSVYSSDLN NEQAMDQVTD WRVLDKFVAS 300 QLSQEEVSKE NDCSNATNAF PTSDDSNLML RHLEKQEMVP EMASTSSSSC QIDLWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-135 | NAC family protein |