PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027103264.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GATA | ||||||||
Protein Properties | Length: 212aa MW: 23549.4 Da PI: 4.8039 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 40.9 | 2.8e-13 | 8 | 37 | 6 | 35 |
GATA 6 ttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 ++TplWR+gp ++ LCnaCG ++r +g+ XP_027103264.1 8 DIETPLWRSGPPEKPVLCNACGSRWRTRGT 37 689********88888**********9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MSENAINDIE TPLWRSGPPE KPVLCNACGS RWRTRGTLED YIPKHAIKDP ENDHSGKLPS 60 KLNQISSSSC HSHEQPPILE SNIAGQELLL PVLGDGTGNG ESTPIGATFS DNFTRVQTIE 120 EAVEFPLWDG NNVFKRKRSI LDQHIMSPTE MLHQQLYYAL QDSQAAAGDY CNGEEVLIFE 180 RINHYIPENE IGLGCILLQP PASPTKNFKP QS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.1 | 3e-20 | GATA family protein |