PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027103039.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 137aa MW: 15516.8 Da PI: 8.8116 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 29.3 | 2.9e-09 | 22 | 79 | 32 | 89 |
FAR1 32 tfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 + Csk+g +++ + + + +rtr+ t+tg k+++ + + + k++v++l+leHnHel XP_027103039.1 22 EDACSKKGVKRKYEGD-VMPKRTRVPTKTGYGVKMVIVLFRgTMKYRVHDLVLEHNHEL 79 557********99999.999******************9999****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MDCSKLVEDG TPELGMEFNS EEDACSKKGV KRKYEGDVMP KRTRVPTKTG YGVKMVIVLF 60 RGTMKYRVHD LVLEHNHELY IAQCSHMMPS QRKVSKTQRF QTEISEVAGL SLKQSHELMG 120 KETGGMGNVG YTRDDVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-08 | FAR1 family protein |