PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027102821.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 21839.7 Da PI: 8.7383 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.1 | 5e-19 | 94 | 146 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr++ +g+++AeIrdp++ g +++lg++ t+e+Aa a+++a+ +++g+ XP_027102821.1 94 TRYRGVRRRA-WGKFAAEIRDPKKKG--SKIWLGTYETPEDAALAYDQAAFEMRGA 146 68*****777.**********96643..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MDSDLALLSF FENHLLNDPD FQDIISEINC YDPLICNPST SFGSFHSCGS GIEMISNTST 60 SNNSSETAGV GSAVRGGQPK ASTARGRQAA VDWTRYRGVR RRAWGKFAAE IRDPKKKGSK 120 IWLGTYETPE DAALAYDQAA FEMRGAKARL NFPNLFGSNT LQPVRVNPRK RSLEPSVLCC 180 STEIDVSKKG KFVVSSMMI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 8e-44 | ERF family protein |