PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027101967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Trihelix | ||||||||
Protein Properties | Length: 389aa MW: 44294.6 Da PI: 6.1404 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 81.8 | 9e-26 | 58 | 134 | 2 | 77 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsesss 77 W ++e++ Li++rre++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk+k++++++ ++++s XP_027101967.1 58 WVQDETRSLIAFRREVDALFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKLKQQDRGNnNCNNSG 134 *****************************************************************999874466554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence |
MYLAHRPRPI DSYKDLSSEE LVMDITPHVD LQQQQMILAD SGGEDHELRA PKKRAETWVQ 60 DETRSLIAFR REVDALFNTS KSNKHLWEQI SSKMREKGFD RSPTMCTDKW RNLLKEFKKL 120 KQQDRGNNNC NNSGSASSAN KMWYYKELEE LLRDRAKNGS YKSPPPPPPS AKVEAYIHFP 180 DKGGLEDGSI PFGSVEENGR ASVNLETPLD NDGDPLTITA ADAVTANEVP PWNWRTSPDA 240 GSDGHPSYGG RVITVKWGEY RRRIGIDGTA DAIKEAIKSA FSLRTKRAFW LEDEDSIIRT 300 IDRDMPLGNY TLHLDEGISF KVCLYNESDR LAVHTEDKTL YTEDDFRDFL TRRGLIGLRE 360 IDGYRCFSNI DDLRPGAVYQ GVRLLGTRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13450.1 | 1e-159 | Trihelix family protein |