PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027101443.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 275aa    MW: 30485.8 Da    PI: 4.5238
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027101443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-19114164255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g ++AeIrd  +   k  r +lg+fgtaeeAa a+++a++k++g
  XP_027101443.1 114 HYRGVRRRP-WGTYAAEIRDsSR---KGGRLWLGTFGTAEEAAMAYDKAALKIRG 164
                     7********.**********332...249************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MAQDEKSTIL ENVWANYIAK SELENAHQNP VESSQTWDDL PGLNSRDGSL LERLPSLGTF  60
ISMGAEAWEQ PLDGANLPNN TESSRTVDSQ ETCSSKKMDS GADEMKVKKV VTRHYRGVRR  120
RPWGTYAAEI RDSSRKGGRL WLGTFGTAEE AAMAYDKAAL KIRGPKAYLN FPLETVAEAM  180
GTCKSIPQDY MDSSATSCQT NDTATSASVT CGEIMSNSRK RVLREWDENE DSFINNAQSA  240
KISAANWEEA AMSDINLLQF PNLESEYLEN LFSLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.15e-32ERF family protein