PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027099510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 215aa MW: 24219 Da PI: 6.6464 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.5 | 4.9e-16 | 14 | 60 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W+++Ed+ l d++k++G g+W+ I++ g+ R++k+c++rw +yl XP_027099510.1 14 RSWSPQEDQELMDYIKKHGEGHWRNIPKATGLLRCGKSCRLRWVNYL 60 68*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 6e-16 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_027099510.1 66 RGDFAEDEEDLIIRLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111 788999****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MRKPCCDKEG MNKRSWSPQE DQELMDYIKK HGEGHWRNIP KATGLLRCGK SCRLRWVNYL 60 RPDLKRGDFA EDEEDLIIRL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LSKKLASMGI 120 DPKHHRLSHH LARNLINSIA AGETSSALEH HQPFPLDHDQ IKSSSASDHY QASDAGDGIN 180 DDDDSSSLLP DLNVDMASDS SLPSGTTTED KMSLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 1e-68 | MYB family protein |