PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027099309.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 412aa MW: 46668.1 Da PI: 7.0073

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027099309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.2	2.7e-52	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL++k+++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_027099309.1 15 MLPGFRFHPTDEELVGFYLRRKIQQRPLSI-ELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 108 579*************************.89***********8888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_027099309.1 109 eGSKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 142 56677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MDERNDSSEK LDEVMLPGFR FHPTDEELVG FYLRRKIQQR PLSIELIKQL DIYKYDPWDL 60 PKLATTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL 120 VFYRGRAAKG IKTDWMMHEF RLPSLSDTGP SKRYMDKNNI PANDAWAICR IFKKANSNAQ 180 RALSHSWISP VPQTTPTTTT SDFLTQNVYG TSNFSSSNMS LTTKTSSVIQ FGDSNSDLQQ 240 SSIASTFSPL DTSPYKSIVN QMSSNIEPSQ ISVSKCDLPP TSTFPTIPIP TSEPLKYTID 300 ASSLLLNMSS SMFGDFDDKV SQDQYFHNFS ITVPDQVTRR NANHDDQEET ALVNDPNVAQ 360 RDQLWGTMQS VGYPFNFPLN MGDAWKSNLF WDSSPCPSSD MSTNFSTNKC YT

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MDERNDSSEK LDEVMLPGFR FHPTDEELVG FYLRRKIQQR PLSIELIKQL DIYKYDPWDL  60
PKLATTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL  120
VFYRGRAAKG IKTDWMMHEF RLPSLSDTGP SKRYMDKNNI PANDAWAICR IFKKANSNAQ  180
RALSHSWISP VPQTTPTTTT SDFLTQNVYG TSNFSSSNMS LTTKTSSVIQ FGDSNSDLQQ  240
SSIASTFSPL DTSPYKSIVN QMSSNIEPSQ ISVSKCDLPP TSTFPTIPIP TSEPLKYTID  300
ASSLLLNMSS SMFGDFDDKV SQDQYFHNFS ITVPDQVTRR NANHDDQEET ALVNDPNVAQ  360
RDQLWGTMQS VGYPFNFPLN MGDAWKSNLF WDSSPCPSSD MSTNFSTNKC YT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-108	NAC family protein