PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027099265.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 159aa MW: 17997.3 Da PI: 6.7889 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.7 | 2.4e-19 | 7 | 143 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk..vePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyW 83 G+rF+P++eel+ + L+ kv++ +++ + +ke ++y + Pw+ + +++++ +y F++ +k +a k++ r++ sg+W XP_027099265.1 7 IGCRFRPSEEELL-YLLRDKVTNPRFQY-DQVKEKKLYGegASPWNVFSdddlqrelfddnGSNGNKRMVYVFTELNKLSA--KKAARTAGSGTW 97 7************.9999*******999.77999998862269***96346777888776433334556799999988765..6999*99***** PP NAM 84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k +++ + +ge++g +k+L + + ++ +k +W+mhey++ XP_027099265.1 98 DGEAKITTIQDMiTGEQIGKRKMLSYVLHSGSEVKKGRWIMHEYAF 143 ***9999999888999***********99999999*********75 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 159 aa Download sequence |
MVEDYAIGCR FRPSEEELLY LLRDKVTNPR FQYDQVKEKK LYGEGASPWN VFSDDDLQRE 60 LFDDNGSNGN KRMVYVFTEL NKLSAKKAAR TAGSGTWDGE AKITTIQDMI TGEQIGKRKM 120 LSYVLHSGSE VKKGRWIMHE YAFAGACLNG IGSSIHNTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G62380.1 | 9e-12 | NAC family protein |