PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027099182.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 306aa    MW: 34998.6 Da    PI: 6.7916
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027099182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.92.5e-1681252122
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkklelee.v.ikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknra..tksgyWkatgkdke 91 
                     ppGf+F Pt+ el+ +yL+ kv+g+k+  e+ v +k v++y++ +P  L +  +++e+ +y F+k +k +++g+r +r+   +s +Wk + k k+
  XP_027099182.1   8 PPGFKFVPTELELL-HYLRSKVNGEKTGYEDeVpLKYVELYNIeDPGVLFE--NTDEDVVYVFTKLRKVAENGSRYERQifGTSCTWKGSDKAKD 99 
                     9*************.**********9554331469999***9967999952..3466788******************52234889********* PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWv 122
                     v++ +g+ vg  k + f k++    +k    
  XP_027099182.1 100 VKE-EGNCVGSIKNFSFEKNQ----VKVGYN 125
                     **9.9999*********8544....344444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MKTSQKFPPG FKFVPTELEL LHYLRSKVNG EKTGYEDEVP LKYVELYNIE DPGVLFENTD  60
EDVVYVFTKL RKVAENGSRY ERQIFGTSCT WKGSDKAKDV KEEGNCVGSI KNFSFEKNQV  120
KVGYNMKELT LDGRLVHNAE FKDYVVCTIK RKSKVLKRKS KNKKKDLQEG TDYLELPMPV  180
SDESLPPHAE LQQYQQMDKT DSPPVSLVFS SPGYHQNPNP CQEINNQMIA DVSLSDQMHG  240
YHYQSNKEVT SIPLMPRSGG NSLGLRIEDP MTDQQWGSRS FGGYNVSMIN NQWGLEKLRE  300
FVAPNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158166RKSKNKKKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.12e-09NAC family protein