PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027097354.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 262aa MW: 28898.9 Da PI: 8.8958 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.9 | 1.8e-48 | 14 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+k+ + +l++ ++i+evd++k++PwdLp e+e yfFskr+ ky++g+r+nrat sgyWkatg dk++++ XP_027097354.1 14 LPPGFRFHPTDEELVVQYLKRKALSCPLPA-SIIPEVDVCKSDPWDLPGD---LERERYFFSKREVKYRSGNRSNRATGSGYWKATGVDKQIVAC 104 79****************************.89***************44...46899***********************************97 PP NAM 96 kgel.....vglkktLvfykgrapkgektdWvmheyrl 128 +++l g+kktLvfy+g+ p+g +tdWvmheyrl XP_027097354.1 105 RSRLgvggvGGVKKTLVFYRGKPPNGIRTDWVMHEYRL 142 44445555599*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MEKLNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKALSCP LPASIIPEVD VCKSDPWDLP 60 GDLERERYFF SKREVKYRSG NRSNRATGSG YWKATGVDKQ IVACRSRLGV GGVGGVKKTL 120 VFYRGKPPNG IRTDWVMHEY RLVNVVEAAA PISPLQNKSA QESWVLCRIF LKRRSGKSSE 180 DEVTESSLPN CTAAAPPPLG GKMNGVVVFY DFLGKDTREL NPGATISSSS GCSGITEISC 240 NEAEDMEESS SCTSLGPFKR NQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 4e-83 | NAC family protein |