PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027097242.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 432aa MW: 48848.3 Da PI: 4.7648

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027097242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100	3.4e-31	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tks 80 lp+G++F+P+d+e++++ L kv ++ +e e+i++v+ i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+ + XP_027097242.1 58 LPRGVKFDPSDKEIIWHLLG-KVGIENmkphpfIE--EFIPTVNeddgICYTHPQNLP-GVKQDGSVAHFFHRAIKAYNTGTRKRRKilgdsSGD 148 799**********76665.55444434654322..33444433345******.677888899**************756655457 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tg++k+v+ + ++g+kk++v+y r k+ekt+Wvmh+y+l XP_027097242.1 149 VRWHKTGRTKAVHL-DCIQKGCKKIMVLYlsPVRGGKPEKTNWVMHQYHL 197 78********.9999******7634777777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MARPSWLVDS NRIATKIRSA SGASDLQQVN WTSNPTKTCP NCQHVIDNSD VTQEWPGLPR 60 GVKFDPSDKE IIWHLLGKVG IENMKPHPFI EEFIPTVNED DGICYTHPQN LPGVKQDGSV 120 AHFFHRAIKA YNTGTRKRRK ILGDSSGDVR WHKTGRTKAV HLDCIQKGCK KIMVLYLSPV 180 RGGKPEKTNW VMHQYHLGTE EDEREGEYVI SKVFYQQQQV KQNEKAEVEV PEDDASIVKV 240 DPVTPKSVTP EPPRTESRFP DCDAQESVLP AAQHHGVVCM EDEVRPPSDQ PNCEDPVSAV 300 DLADQQDDKT DNDAGEKREW WDSESQYLLD SQQLVEALSL CDEFLRSQSP NRDGDKNEQE 360 LKPKPRLADY AHLGPEHLKK DLEECQDLVL DPVNLELDTP PDFRLSQLEF ASQDSFISWG 420 GNKSADIEEH GT

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MARPSWLVDS NRIATKIRSA SGASDLQQVN WTSNPTKTCP NCQHVIDNSD VTQEWPGLPR  60
GVKFDPSDKE IIWHLLGKVG IENMKPHPFI EEFIPTVNED DGICYTHPQN LPGVKQDGSV  120
AHFFHRAIKA YNTGTRKRRK ILGDSSGDVR WHKTGRTKAV HLDCIQKGCK KIMVLYLSPV  180
RGGKPEKTNW VMHQYHLGTE EDEREGEYVI SKVFYQQQQV KQNEKAEVEV PEDDASIVKV  240
DPVTPKSVTP EPPRTESRFP DCDAQESVLP AAQHHGVVCM EDEVRPPSDQ PNCEDPVSAV  300
DLADQQDDKT DNDAGEKREW WDSESQYLLD SQQLVEALSL CDEFLRSQSP NRDGDKNEQE  360
LKPKPRLADY AHLGPEHLKK DLEECQDLVL DPVNLELDTP PDFRLSQLEF ASQDSFISWG  420
GNKSADIEEH GT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	0.0	NAC family protein