PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027096284.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 130aa MW: 14632.8 Da PI: 10.1577 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.1 | 3.2e-14 | 6 | 124 | 2 | 109 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykve..PwdLpk...........kvkaeekewyfFskrdkkyatgkrknratksgyW 83 p GfrF+Pt+eel+ L k+++++ ++++++++ ++y v+ Pw++ + + +++++ ++ ++ ++ + ++ r++ sg+W XP_027096284.1 6 PLGFRFRPTEEELI-TLLWFKATNQQQHITDAVPKKKLYGVDalPWNIFAeddvrwelsddS-GKKRTKRVTYAVTKLSKISPNKVARTAGSGMW 98 89************.88999999999999999*****9998666****63477888776642.223334445555555555567999*99***** PP NAM 84 katgkdkevlskkgelvglkktLvfy 109 + + k k+vl+++ge++g k+L + XP_027096284.1 99 EGQSKGKDVLNSRGETIGSIKMLSYV 124 ***********************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MVRDCPLGFR FRPTEEELIT LLWFKATNQQ QHITDAVPKK KLYGVDALPW NIFAEDDVRW 60 ELSDDSGKKR TKRVTYAVTK LSKISPNKVA RTAGSGMWEG QSKGKDVLNS RGETIGSIKM 120 LSYVLNSGSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 9e-08 | NAC family protein |