PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027096046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HSF | ||||||||
Protein Properties | Length: 354aa MW: 40369 Da PI: 5.6352 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 111.8 | 4.6e-35 | 43 | 134 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++++++d+++++++sws+ g+sfvv+d++ f++ +Lp++Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k+ll++ XP_027096046.1 43 FLTKTFDMVDDSTTDHIVSWSRGGHSFVVWDPHAFSTALLPRFFKHNNFSSFVRQLNTYGFRKIDPDK---------WEFANEAFLRGQKHLLRN 128 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_027096046.1 129 IRRRKA 134 ***986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
MDPPYPVKEE YPDQYHAGSS SSPPGTLAPQ PMEGLHDAGP PPFLTKTFDM VDDSTTDHIV 60 SWSRGGHSFV VWDPHAFSTA LLPRFFKHNN FSSFVRQLNT YGFRKIDPDK WEFANEAFLR 120 GQKHLLRNIR RRKAPSQPTS PQQALGPCVE VGRFGLDAEV DRLRRDKQVL MMELVKLRQQ 180 QQSTRAHLQS MEVRLQGTEK KQQHMMSFLA KAMQNPEFIH QLIQQKDKRK ELEEAFTKKR 240 PRPIDQGPGG GESSRSGEVR NHVKAEPSEF GDHYGYQVSE LEALALEMQG FGRAARRDRD 300 EEQDELEKEL DEGFWEELLN EGFDEEGETG KEGGGEEDVN VLADRFGFLG SSPK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 239 | 243 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22830.1 | 1e-122 | HSF family protein |