PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027095941.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21953.7 Da PI: 10.1897 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.5e-19 | 113 | 163 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+WvAeIrdp + k+++lg+++tae Aa a+++a+ +++g XP_027095941.1 113 KKFRGVRQRC-WGSWVAEIRDPI----KqKQVWLGTYDTAENAAIAYDRAAIQFRG 163 59*****876.**********72....35***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MSNTEKVKYS EHLMQTTKFI SQSDVNAYPK VLGILVTDPH YTDSSSDEEG STSHRYRVKK 60 YINEIIFKHL PFEENCNNDG NVKEKPSNRN VAGNKRKRKG TEKAESKDES KRKKFRGVRQ 120 RCWGSWVAEI RDPIKQKQVW LGTYDTAENA AIAYDRAAIQ FRGTKAITNF LPPPPVKDEL 180 SSITTRAVNR TG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 95 | 114 | KRKRKGTEKAESKDESKRKK |
2 | 96 | 115 | KRKRKGTEKAESKDESKRKK |
3 | 97 | 116 | KRKRKGTEKAESKDESKRKK |
4 | 111 | 137 | KRKKFRGVRQRCWGSWVAEIRDPIKQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 1e-31 | ERF family protein |