PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027095055.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 272aa    MW: 29714.7 Da    PI: 7.4755
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027095055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.65.2e-3263118359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     ++r++eClkNhA+++GghavDGCgEfm++ geegt ++lkCaAC+CHRnFHR+e+e 
  XP_027095055.1  63 SYRFRECLKNHAVAIGGHAVDGCGEFMAA-GEEGTLESLKCAACNCHRNFHRKETEG 118
                     689*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEFDEHEEQE EEIGMHQMQA GNYQTLGNSA GRGGGGEGVS AATTARKNGG GGGSMATTST  60
TTSYRFRECL KNHAVAIGGH AVDGCGEFMA AGEEGTLESL KCAACNCHRN FHRKETEGEG  120
FHQPHPTPHH PHHHHPHHAH HQFSPAYPFR SPHPSGYLHV TPPSHHHHQR PLPLPSTSRE  180
DEDVSNPSSS GGGGGGGSGG AGGSKKRFRT KFTPDQKEKM LAFAERLGWR IQKQDEALVQ  240
QFCAETNVKR HVLKVWMHNN KHTLENATFC VH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-63ZF-HD family protein