PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027094930.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 266aa    MW: 29681 Da    PI: 6.8745
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027094930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.69.1e-312810553129
             NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      +++ewyfFs rd+kyatg r+nrat++gyWkatgkd++vl+  +++ vg++ktLvfy++rap+g kt W+mhe+rle
  XP_027094930.1  28 LNSNEWYFFSFRDRKYATGFRTNRATTTGYWKATGKDRTVLDPtRRSIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 105
                     4678**************************************977788***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDFAPSNESS IDRPLLYWLF VKKDVAKLNS NEWYFFSFRD RKYATGFRTN RATTTGYWKA  60
TGKDRTVLDP TRRSIVGMRK TLVFYRNRAP NGIKTGWIMH EFRLENPHVP PKEDWVLCRV  120
FHKAKVESVD NDVYDATAGG GCGGGGDISP TFAASPPNVD HCTAGGYNQN SSFSQSPPHQ  180
SQNSSSTAAL PNMSAVLGRN YLQSSSQELC SVTASRNDQM VHSKSELDEY GFLFNMNFGE  240
ANLRDGGVPS GLEEMHFDDD SSLVFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-61NAC family protein