PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027094925.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 299aa MW: 33359.1 Da PI: 6.2357 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 163.2 | 9.8e-51 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelv++yL kk+++ +++ +++ e+d++++ePw+Lp +k +++ewyfFs rd+kyatg r+nrat++gyWkatgkd++vl+ XP_027094925.1 10 LPPGFRFYPSDEELVCHYLYKKIANGEVSR-DTLVEIDLHTCEPWQLPDVAKLNSNEWYFFSFRDRKYATGFRTNRATTTGYWKATGKDRTVLDP 103 79*************************999.88***************87778899**************************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++ vg++ktLvfy++rap+g kt W+mhe+rle XP_027094925.1 104 tRRSIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 138 77788***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIANGEVSRD TLVEIDLHTC EPWQLPDVAK 60 LNSNEWYFFS FRDRKYATGF RTNRATTTGY WKATGKDRTV LDPTRRSIVG MRKTLVFYRN 120 RAPNGIKTGW IMHEFRLENP HVPPKEDWVL CRVFHKAKVE SVDNDVYDAT AGGGCGGGGD 180 ISPTFAASPP NVDHCTAGGY NQNSSFSQSP PHQSQNSSST AALPNMSAVL GRNYLQSSSQ 240 ELCSVTASRN DQMVHSKSEL DEYGFLFNMN FGEANLRDGG VPSGLEEMHF DDDSSLVFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 3e-90 | NAC family protein |