PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027094762.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 309aa    MW: 35198.1 Da    PI: 7.0974
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027094762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.93.3e-5271311128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelv++yL++k++++ + +  +i+e+d+yk++PwdLp  +  +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + 
  XP_027094762.1   7 LPPGFRFHPTDEELVMHYLCRKCASQVIAV-PIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGN- 99 
                     79*************************999.88***************6555679*************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + vg+kk Lvfy g+apkgekt+W+mheyrl
  XP_027094762.1 100 -PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRL 131
                     .789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MGSDLQLPPG FRFHPTDEEL VMHYLCRKCA SQVIAVPIIA EIDLYKYDPW DLPGLALYGE  60
KEWYFFSPRD RKYPNGSRPN RAAGSGYWKA TGADKPIGNP KPVGIKKALV FYAGKAPKGE  120
KTNWIMHEYR LADVDRSARK KNNNNLRLDD WVLCRIYNKK GSIDKQQVSS VSRKMMMMSN  180
SRQVEETEED KKPVIMTSLA ETSPVVYSDF MYLDPADSVP KLHTDSSCSE QVVSPEFSSH  240
NTCEVQSERK LSDWEKAALD FPFNYVDAPA MDSTGNALMN PPPPPPPHFQ GTYQMSPLQD  300
MFMYLQKPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-142NAC family protein