PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027094416.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 468aa MW: 51447.2 Da PI: 4.9059

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027094416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.1	4.6e-34	256	310	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ XP_027094416.1 256 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 310 79****************************************************8 PP
2	Myb_DNA-binding	56.3	7.6e-18	258	309	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ XP_027094416.1 258 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 309 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MEARPALSIQ RSGTQQLNNC GPSGALSTSF PVLPSALEEK YPNLPDSQQV PVERQFKPCT 60 STVVSPISSS SGVVGHMFSS SSGLSTDLHF SSVSQQEKHS RQSPFISQST SCGTSMLFQQ 120 ASHSGVLQST ASSQYTKENN DTSWCTDSLD FLDYPINQNN PLDSCNTGEI LPSEDLNKRN 180 WQEWADQLIS DDDALTSSWN ELIAETNVTD PGLKVPQQST TFSIQQPQAS QQLPASSGET 240 GPVVPPTPSG SGAPTKQRMR WTPELHEAFV EAVNKLGGSE RATPKGVLKL MKVEGLTIYH 300 VKSHLQKYRT ARYKPEPSEG SSEKKHALID DLSSLDLKSG IEITEALRLQ MEVQKRLHEQ 360 LEIQRNLQLR IEEQGRYLQM MFEKQCKSGL DLLKGSSSNL ENPLTDLTEP VLKSPDKSNL 420 GVSEGNDHKM DEVGEKQKSP ENEVPENLEA TATDTPNSPP PKRAKLDE

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MEARPALSIQ RSGTQQLNNC GPSGALSTSF PVLPSALEEK YPNLPDSQQV PVERQFKPCT  60
STVVSPISSS SGVVGHMFSS SSGLSTDLHF SSVSQQEKHS RQSPFISQST SCGTSMLFQQ  120
ASHSGVLQST ASSQYTKENN DTSWCTDSLD FLDYPINQNN PLDSCNTGEI LPSEDLNKRN  180
WQEWADQLIS DDDALTSSWN ELIAETNVTD PGLKVPQQST TFSIQQPQAS QQLPASSGET  240
GPVVPPTPSG SGAPTKQRMR WTPELHEAFV EAVNKLGGSE RATPKGVLKL MKVEGLTIYH  300
VKSHLQKYRT ARYKPEPSEG SSEKKHALID DLSSLDLKSG IEITEALRLQ MEVQKRLHEQ  360
LEIQRNLQLR IEEQGRYLQM MFEKQCKSGL DLLKGSSSNL ENPLTDLTEP VLKSPDKSNL  420
GVSEGNDHKM DEVGEKQKSP ENEVPENLEA TATDTPNSPP PKRAKLDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	9e-89	G2-like family protein