PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027094052.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 409aa    MW: 44989.2 Da    PI: 6.5971
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027094052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-1981129355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr++  +g+WvAeIr+p++     r +lg+fgta eAa a+++a++ ++g
  XP_027094052.1  81 YRGVRQRT-WGKWVAEIREPKK---GSRLWLGTFGTAIEAALAYDKAARVMYG 129
                     9****999.**********954...4**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MSPLKPASDE TSLTLGPFGR KNSKRRSDAS KHVSETLNKW KEYFDKIEST NGKLVRKAPG  60
RGSKKGCMKG KGGPENSRHN YRGVRQRTWG KWVAEIREPK KGSRLWLGTF GTAIEAALAY  120
DKAARVMYGP SAQLNLPNYN VVKEASTEPS LELTISIPES TLTTSHAEFA KAEDSKVTSE  180
TSYHSASVPS FAGKEEMVTS FPEHGEKGSS SPLLSSVESQ IVHENSKSSC NDEASQHVID  240
SPTERKEVTD KSGTMDEGCK TMYEENSENS TEECIIPRGL EKSDSNYECV EEMPLAEWFA  300
EIRNRNMRDR LPLGTVGTAR SINGASSWLK LSNDCSKVST RESFLVPTVL ASNCETTSKC  360
KNESPETCQC LDFGDENDSF EGLGTKLHHP GPPNVLSTSC FLLQAPFCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.22e-35ERF family protein