PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027093877.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 386aa MW: 43515.3 Da PI: 7.1251

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027093877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.8	8.5e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yL+kk++ +k+++ ev++evd++k+ePw+L++++k ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_027093877.1 8 VPPGFRFHPTDEELLHYYLRKKLSFQKFDM-EVVREVDLNKIEPWELQERCKIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 101 69**************************.99**********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_027093877.1 102 RN-SFQKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137 9.8899***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MASSNGGVPP GFRFHPTDEE LLHYYLRKKL SFQKFDMEVV REVDLNKIEP WELQERCKIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSFQKIGM RKTLVFYRGR 120 APHGQKTDWI MHEYRLEDGD DPEANPNEDG WVVCRVFKKK NLFKVGNGGG TGGGSGAAAS 180 DHLNATASAN INQPRGFMHR ENQYLFHQQH HPHVLAGYSH MIPLPSMPHQ QQYSAQQIQA 240 QNFIPTHKPQ LDAVGYDLSA FSSAASESIV VPMMQVRQLM ANARDCDSGE SDQNDTSLRT 300 YQQACESGLE VGTNSCEPSQ HQSMITTGDD QNLNEWGMLD PRLGNAHDSS KGARFEVGEP 360 NNPSNSMNHV SQLSPRGEMD FWGYGK

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MASSNGGVPP GFRFHPTDEE LLHYYLRKKL SFQKFDMEVV REVDLNKIEP WELQERCKIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSFQKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDGD DPEANPNEDG WVVCRVFKKK NLFKVGNGGG TGGGSGAAAS  180
DHLNATASAN INQPRGFMHR ENQYLFHQQH HPHVLAGYSH MIPLPSMPHQ QQYSAQQIQA  240
QNFIPTHKPQ LDAVGYDLSA FSSAASESIV VPMMQVRQLM ANARDCDSGE SDQNDTSLRT  300
YQQACESGLE VGTNSCEPSQ HQSMITTGDD QNLNEWGMLD PRLGNAHDSS KGARFEVGEP  360
NNPSNSMNHV SQLSPRGEMD FWGYGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-134	NAC family protein