PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027093747.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 205aa MW: 23156.2 Da PI: 8.717 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.4 | 1.6e-25 | 73 | 160 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Y +YAk vGF vrksks++ + g+ + rtf+Cs egkr ++k++ + + +r++tr+gC a++kv+ +++gk++v++++ eHnH l+ XP_027093747.1 73 QYYLAYAKLVGFGVRKSKSHND-KYGKLIARTFCCSAEGKRGKDKQD-GSVKAPRPKTRCGCLARMKVNSRQTGKFRVIEFVVEHNHYLS 160 69***************99888.6777****************9999.999************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MGSKPSPCRQ LHFEEFKEQE EDFDIVNEGN IHDIEETSGL NSVKDLNKIH SSIPNETIPH 60 IGMEFETEDQ AWQYYLAYAK LVGFGVRKSK SHNDKYGKLI ARTFCCSAEG KRGKDKQDGS 120 VKAPRPKTRC GCLARMKVNS RQTGKFRVIE FVVEHNHYLS SPNKTHLYRS HRSITSNLAV 180 DIEMAHNVGI APKVAHELMA RQAGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-24 | FAR1 family protein |