PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027093554.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 199aa    MW: 22335.5 Da    PI: 8.7549
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027093554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.83.9e-1861442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 
                     p GfrF+P++eel+   L  kv+++  e+ +++ke  +y   +ePwd                k +++++ +y F+k +k +a  k++ ra+  g
  XP_027093554.1   6 PIGFRFRPSEEELI-SLLWLKVTNQLDET-DHVKEKILYgeGAEPWDVLGdddvrwqfcddsgKGASTKRMVYVFTKLRKLSA--KKAARAAGLG 96 
                     89************.88999999988777.6777776662257****963468889988876543345557799999988765..6999****** PP

             NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +W    k+ +v    +ge++g +k+L +  +  + g+k  W+mhey+l
  XP_027093554.1  97 TWDGETKSYPVEGMiTGEKIGSRKMLSYVLNFGSIGVKGGWIMHEYSL 144
                     ***999999998878999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MADNIPIGFR FRPSEEELIS LLWLKVTNQL DETDHVKEKI LYGEGAEPWD VLGDDDVRWQ  60
FCDDSGKGAS TKRMVYVFTK LRKLSAKKAA RAAGLGTWDG ETKSYPVEGM ITGEKIGSRK  120
MLSYVLNFGS IGVKGGWIMH EYSLDGASLN ELNSSHNIDY VLCRIIKDDS KYTKVKESAT  180
KGKVAKEKEV GNRGCQRKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54330.16e-12NAC family protein