PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027093552.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 277aa    MW: 30879.1 Da    PI: 7.3354
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027093552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.91.7e-1861442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 
                     p GfrF+P++eel+   L  kv+++  e+ +++ke  +y   +ePwd                k +++++ +y F+k +k +a  k++ r++  g
  XP_027093552.1   6 PIGFRFRPSEEELI-SLLWLKVTNQLDET-DHVKEKILYgeGAEPWDVLGdddvrwqfcdnsgKGASTKRMVYVFTKLRKLSA--KKTARTAGLG 96 
                     89************.88999999988777.6777776662257****963468889988876533334557799999988765..6999*99*** PP

             NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +W    k+ +v    +ge++g +k+L +  ++ + g+k  W+mhey+l
  XP_027093552.1  97 TWDGETKSYPVEGMiTGEKIGSRKMLSYVLNSGSIGVKGGWIMHEYSL 144
                     ***999999998878999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MADNIPIGFR FRPSEEELIS LLWLKVTNQL DETDHVKEKI LYGEGAEPWD VLGDDDVRWQ  60
FCDNSGKGAS TKRMVYVFTK LRKLSAKKTA RTAGLGTWDG ETKSYPVEGM ITGEKIGSRK  120
MLSYVLNSGS IGVKGGWIMH EYSLDGASLN GLNSSHNTDY VLCRIIKDDS KYTKVKESAK  180
KGKVAKEKEV GNRGCREVVL GKGKMNLEQE SSQASKKSCN NPMDELPNLV NCEYDGYTRS  240
LQTYTGLLDD VVQPIICWNG DPYLGSVPDM VHCSLRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.17e-14NAC family protein